Fedora 40: jni-inchi 2024-129d8ca6fc
Summary
JNI-InChI enables Java software to generate IUPAC's International
Chemical Identifiers (InChIs) by making Java Native Interface (JNI) calls
to the InChI C library developed by IUPAC. All of the features from the
InChI library are supported:
- Standard and Non-Standard InChI generation from structures with 3D, 2D,
or no coordinates
- Structure generation (without coordinates) from InChI
- InChIKey generation
- Check InChI / InChIKey
- InChI-to-InChI conversion
- AuxInfo to InChI input
- Access to the full range of options supported by InChI
- Full support for InChI's handling of stereochemistry
JNI-InChI is a library intended for use by developers of other projects.
It does not enable users to generate InChIs from molecule file formats
such as .mol, .cml, .mol2, or SMILES strings. If you want to do any of
these, you should take a look at the Chemistry Development Kit (CDK) or
JUMBO, both of which include InChI generation powered by JNI-InChI. If,
however, you are a software developer and you want want to generate the
InChI for a molecule that you already hold in memory, JNI-InChI is what
you need.
Update Information:
Change for system JDK from 17 to 21. upstream security release 122.0.6261.94 High CVE-2024-1938: Type Confusion in V8 High CVE-2024-1939: Type Confusion in V8 fixed bug with requires Automatic update for lucene-9.9.2-1.fc40. bump java source/target to 1.8, fixes 2266639
Change Log
* Sat Mar 2 2024 Jiri Vanek
References
[ 1 ] Bug #2123726 - consoleImageViewer crashes at start https://bugzilla.redhat.com/show_bug.cgi?id=2123726 [ 2 ] Bug #2261062 - directory-maven-plugin: FTBFS in Fedora rawhide/f40 https://bugzilla.redhat.com/show_bug.cgi?id=2261062 [ 3 ] Bug #2266639 - directory-maven-plugin fails to build with java-21-openjdk https://bugzilla.redhat.com/show_bug.cgi?id=2266639 [ 4 ] Bug #2266934 - CVE-2024-1938 chromium: type confusion [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=2266934 [ 5 ] Bug #2266937 - CVE-2024-1939 chromium: type confusion [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=2266937 [ 6 ] Bug #2267486 - Include Java 21 as system Java Change in Fedora 40 Beta https://bugzilla.redhat.com/show_bug.cgi?id=2267486
Update Instructions
This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2024-129d8ca6fc' at the command line. For more information, refer to the dnf documentation available at https://dnf.readthedocs.io/en/latest/command_ref.html